PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011085663.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family TCP
Protein Properties Length: 329aa    MW: 36303.5 Da    PI: 8.3828
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011085663.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP137.21.4e-42872182125
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.........ssssasec.eaesssssasnss 86 
                     +++kdrhski+T++g+RdRRvRls+ +a++fFdLq++LGfdk+skt++WLl+++k+aik+l++t         ssss+sec e++ +s +++++s
  XP_011085663.1  87 TPRKDRHSKIYTAQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAIKDLVQTkrnagsggkSSSSPSECeEESGESFENGADS 181
                     79******************************************************************999986666689955555555555666 PP

             TCP  87 sgkaaksaakskksqksaasalnlakesrakarararer 125
                     +gk+a  ++k+  +++++a   nlakesr + +++ r++
  XP_011085663.1 182 KGKSAILKNKGGMDPQQTA--VNLAKESRLSTDQTCRNS 218
                     7777777778888888888..********8888887765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.8E-3788197IPR005333Transcription factor, TCP
PROSITE profilePS5136936.64189147IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MFSKNNYLLQ QQVSPSLHSR ASTSSFDLNG AEILLHHHHQ MLAGHYMAAN APVLDAATLF  60
NQDLPGSCLN GGDPNSAFLN MGSRKQTPRK DRHSKIYTAQ GPRDRRVRLS IGIARKFFDL  120
QEMLGFDKPS KTLDWLLTKS KTAIKDLVQT KRNAGSGGKS SSSPSECEEE SGESFENGAD  180
SKGKSAILKN KGGMDPQQTA VNLAKESRLS TDQTCRNSTV CYDLNPSIPI HNNSSSLNMD  240
LHCPLTYEAA AANEDLTQES IVIKRKVKHP SIFGFHQQNL MVWRDSSSNC SIPSPYTVTE  300
NWDISSFTSQ SNLSAILDQH KFNHSTSNN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKM5267961e-115KM526796.1 Sesamum triphyllum TCP transcription factor (CYC2B) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011085663.10.0PREDICTED: transcription factor CYCLOIDEA-like
SwissprotQ9SNW85e-79DICH_ANTMA; Transcription factor DICHOTOMA
TrEMBLA0A096ZGA01e-109A0A096ZGA0_9LAMI; TCP transcription factor (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43332244
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.23e-29TCP family protein